Well, you didn't really say very much at all in your original post. Sorry. If you had explained everything like you just did, then I wouldn't have replied because then I would have known that I don't know what the answer is. Judging from your original post though (and only your original post), it sounds like normal results from f.lux doing its thing. Judging from your reply here, yes, I can see what you're saying now but you didn't say anything like this in your original post.
I could only go by what you said.