Transitions are still very choppy when main window isn't in focus
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If the main f.lux window is in focus, then transitions are smooth. If it's not in focus, then transitions are very choppy.
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Now it's only choppy when the f.lux window is closed. Inch by inch, f.lux keeps getting better and better. I don't care about anything negative that some people might say about it, this is the best version so far.