Cross-platform compatibility
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When is f.lux going to present the same options and user interface across all three platforms? It's rather irritating to have it completely dialed in on the Windows systems and then not able to setup the Mac to run the same settings. When they are located side-by-side, one fades late (due to not having the "over 60 minutes" option) and the color levels aren't the same (as on Windows 1900K is an option and it isn't on the Mac).
I'd also like to see a way of outputting the R/B/G or color profile information, so that those of us with the ability can use an arduino to translate that into real light control without having to buy expensive lighting control systems designed for artistic purposes.